Index

_

__init__() (actio_python_utils.argparse_functions.CustomFormatter method) (actio_python_utils.argparse_functions.EnhancedArgumentParser method) (actio_python_utils.argparse_functions.ZFileType method) (actio_python_utils.database_functions.DBConnection method) (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) (actio_python_utils.logging_functions.LazyLogger method) (actio_python_utils.utils.CustomCSVDialect method) (actio_python_utils.utils.DictToFunc method) (actio_python_utils.utils.NumericValue method)

A

actio_python_utils module actio_python_utils.actio_python_utils module actio_python_utils.argparse_functions module actio_python_utils.cli module actio_python_utils.database_functions module actio_python_utils.logging_functions module actio_python_utils.spark_functions module

actio_python_utils.utils module add_argument() (actio_python_utils.argparse_functions.EnhancedArgumentParser method) add_db_service_argument() (actio_python_utils.argparse_functions.EnhancedArgumentParser method) add_log_format_argument() (actio_python_utils.argparse_functions.EnhancedArgumentParser method) add_log_level_argument() (actio_python_utils.argparse_functions.EnhancedArgumentParser method) add_spark_config_argument() (actio_python_utils.argparse_functions.EnhancedArgumentParser method) add_spark_cores_argument() (actio_python_utils.argparse_functions.EnhancedArgumentParser method) add_spark_load_config_argument() (actio_python_utils.argparse_functions.EnhancedArgumentParser method) add_spark_memory_argument() (actio_python_utils.argparse_functions.EnhancedArgumentParser method) addFilter() (actio_python_utils.logging_functions.LazyLogger method) addHandler() (actio_python_utils.logging_functions.LazyLogger method) arraysize (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute)

C

callHandlers() (actio_python_utils.logging_functions.LazyLogger method) callproc() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) cast() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) cast_chromosome_to_int() (in module actio_python_utils.utils) check_valid_output_directory() (in module actio_python_utils.utils) close() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) closed (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute) coalesce() (in module actio_python_utils.utils) confirm_table_and_file_columns_match() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) connect() (actio_python_utils.database_functions.DBConnection method) connect_to_db() (in module actio_python_utils.database_functions) connection (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute)

convert_chromosome() (in module actio_python_utils.spark_functions) convert_dicts_to_dataframe() (in module actio_python_utils.spark_functions) copy_expert() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) copy_from() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) copy_to() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) copy_to_csv() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) count_columns_with_string() (in module actio_python_utils.spark_functions) count_distinct_values() (in module actio_python_utils.spark_functions) count_nulls() (in module actio_python_utils.spark_functions) critical() (actio_python_utils.logging_functions.LazyLogger method) CustomCSVDialect (class in actio_python_utils.utils) CustomFormatter (class in actio_python_utils.argparse_functions)

D

DBConnection (class in actio_python_utils.database_functions) debug() (actio_python_utils.logging_functions.LazyLogger method) (in module actio_python_utils.utils) description (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute) DictToFunc (class in actio_python_utils.utils)

dir_exists() (in module actio_python_utils.argparse_functions) disconnect() (actio_python_utils.database_functions.DBConnection method) drop_table_constraints() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) drop_table_keys() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method)

E

EnhancedArgumentParser (class in actio_python_utils.argparse_functions) error() (actio_python_utils.argparse_functions.EnhancedArgumentParser method) (actio_python_utils.logging_functions.LazyLogger method) exception() (actio_python_utils.logging_functions.LazyLogger method)

execute() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) executemany() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) extract_excel_sheet() (in module actio_python_utils.utils)

F

fatal() (actio_python_utils.logging_functions.LazyLogger method) fetchall() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) fetchmany() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method)

fetchone() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) file_exists() (in module actio_python_utils.argparse_functions) filter() (actio_python_utils.logging_functions.LazyLogger method) findCaller() (actio_python_utils.logging_functions.LazyLogger method) flatten_cfg() (in module actio_python_utils.utils)

G

get_csv_fields() (in module actio_python_utils.utils) get_db_args() (in module actio_python_utils.database_functions) get_db_table_columns() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method)

get_pg_config() (in module actio_python_utils.database_functions) get_table_constraint_statements() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) getChild() (actio_python_utils.logging_functions.LazyLogger method) getEffectiveLevel() (actio_python_utils.logging_functions.LazyLogger method)

H

handle() (actio_python_utils.logging_functions.LazyLogger method)

hasHandlers() (actio_python_utils.logging_functions.LazyLogger method)

I

import_table() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) info() (actio_python_utils.logging_functions.LazyLogger method)

isEnabledFor() (actio_python_utils.logging_functions.LazyLogger method) itersize (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute)

K

key_value_pair() (in module actio_python_utils.argparse_functions)

L

lastrowid (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute) LazyLogger (class in actio_python_utils.logging_functions) load_dataframe() (in module actio_python_utils.spark_functions) load_db_to_dataframe() (in module actio_python_utils.spark_functions)

load_excel_to_dataframe() (in module actio_python_utils.spark_functions) load_xml_to_dataframe() (in module actio_python_utils.spark_functions) log() (actio_python_utils.logging_functions.LazyLogger method) (in module actio_python_utils.logging_functions) LoggingCursor (class in actio_python_utils.database_functions)

M

main() (in module actio_python_utils.cli) makeRecord() (actio_python_utils.logging_functions.LazyLogger method) module actio_python_utils actio_python_utils.actio_python_utils actio_python_utils.argparse_functions actio_python_utils.cli actio_python_utils.database_functions actio_python_utils.logging_functions actio_python_utils.spark_functions actio_python_utils.utils

mogrify() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method)

N

nextset() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method)

NumericValue (class in actio_python_utils.utils)

O

open_bz2() (in module actio_python_utils.utils) open_gz() (in module actio_python_utils.utils)

open_pipe() (in module actio_python_utils.utils) open_xz() (in module actio_python_utils.utils)

P

parse_args() (actio_python_utils.argparse_functions.EnhancedArgumentParser method)

pgresult_ptr (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute)

Q

query (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute)

R

removeFilter() (actio_python_utils.logging_functions.LazyLogger method) removeHandler() (actio_python_utils.logging_functions.LazyLogger method) rename_dict_keys() (in module actio_python_utils.utils) replace_dict_values_with_global_definition() (in module actio_python_utils.database_functions)

rowcount (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute) rownumber (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute)

S

sanitize_argument() (actio_python_utils.argparse_functions.EnhancedArgumentParser static method) savepoint() (in module actio_python_utils.database_functions) savepoint_wrapper() (in module actio_python_utils.database_functions) SavepointCursor (class in actio_python_utils.database_functions) scroll() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) scrollable (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute) serialize_array_field() (in module actio_python_utils.spark_functions) serialize_bool_field() (in module actio_python_utils.spark_functions) serialize_field() (in module actio_python_utils.spark_functions) serialize_string_field() (in module actio_python_utils.spark_functions) serialize_struct_field() (in module actio_python_utils.spark_functions) setinputsizes() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method)

setLevel() (actio_python_utils.logging_functions.LazyLogger method) setoutputsize() (actio_python_utils.database_functions.LoggingCursor method) (actio_python_utils.database_functions.SavepointCursor method) setup_database() (actio_python_utils.argparse_functions.EnhancedArgumentParser method) setup_logging() (actio_python_utils.argparse_functions.EnhancedArgumentParser method) (in module actio_python_utils.logging_functions) setup_spark() (actio_python_utils.argparse_functions.EnhancedArgumentParser method) (in module actio_python_utils.spark_functions) split_dataframe_to_csv_by_column_value() (in module actio_python_utils.spark_functions) split_schema_from_table() (in module actio_python_utils.database_functions) statusmessage (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute) str_from_file() (in module actio_python_utils.argparse_functions) sync_to_s3() (in module actio_python_utils.utils)

T

timer() (in module actio_python_utils.utils)

W

warning() (actio_python_utils.logging_functions.LazyLogger method) which() (in module actio_python_utils.utils)

withhold (actio_python_utils.database_functions.LoggingCursor attribute) (actio_python_utils.database_functions.SavepointCursor attribute)

Z

ZFileType (class in actio_python_utils.argparse_functions)

zopen() (in module actio_python_utils.utils)